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Intron Name: Anas_platyrhynchos_platyrhynchos_13_14325913_14326123_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
14325913 - 14326123

Intron Length:
211

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGAGTTTT

5'SS Class:
strong_major

3'SS Sequence:
TCATGTCTTCTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTATAAT

U12 Branch Point Sequence:
ACATGTATAATT

Flanking Amino Acid:
DSLKPEFEKKLQEWPSSYTK

Intron Amino Acid Position:
96

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
94.9
1.06
0.6
93
14.8

Major BPS
70.1
0.5
1.3
72.3
40.4

Major PPT
74.3
0.55
0.9
66
40.6

Minor 5ss
40.7
-1
3
57.8
46.8

Minor BPS
47.3
-0.1
2
63.59
41.3

Associated Gene:

Gene:
GXYLT2

Ensembl Gene ID:

Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14311675 - 14326408
14734