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Intron Name: Anas_platyrhynchos_platyrhynchos_13_14339321_14339454_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14339321 - 14339454

Intron Length:

134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTTAGTATC

5'SS Class:

major

3'SS Sequence:

TTCTTGCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATCAT

U12 Branch Point Sequence:

CAGTCATCATCT

Flanking Amino Acid:

ELHKDLALSLLLTLPGRIVE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.9

0.35

1.3

70.7

39.4

Major BPS

75.6

0.64

1.1

76.2

37.5

Major PPT

78.3

0.64

0.8

72.5

32.4

Minor 5ss

39.6

-1.2

2.8

57.8

39.3

Minor BPS

45.9

-0.2

62.71

46.7

Associated Gene:

Gene:

SHQ1

Ensembl Gene ID:

ENSAPLG00000013926

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029609

14339034 - 14383206

44173