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Intron Name: Anas_platyrhynchos_platyrhynchos_13_14339520_14340340_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

14339520 - 14340340

Intron Length:

821

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTATGGTTA

5'SS Class:

weak_major

3'SS Sequence:

ACTTTCCTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AATATCATAACT

Flanking Amino Acid:

REKASYNVDKRTLTIRLPKE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.1

0.4

1.3

68.4

39.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.1

0.52

76.2

Minor 5ss

47.8

-0.2

62.6

42.8

Minor BPS

61.2

0.43

1.6

77.52

Associated Gene:

Gene:

SHQ1

Ensembl Gene ID:

ENSAPLG00000013926

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040120

14337637 - 14383206

45570

ENSAPLT00000029609

14339034 - 14383206

44173

ENSAPLT00000021856

14337637 - 14383206

45570

ENSAPLT00000014512

14337637 - 14383206

45570