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Intron Name: Anas_platyrhynchos_platyrhynchos_13_14343582_14350563_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14343582 - 14350563

Intron Length:

6982

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TTACTTTATGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTTACTTTATGT

Flanking Amino Acid:

SHQKHDSNAVVVFTEEEKEQ

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.8

73.9

29.7

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

77.2

0.61

0.9

74.1

35.4

Minor 5ss

25.3

-2.8

3.1

30.4

42.9

Minor BPS

58.3

0.34

1.9

80.29

41.9

Associated Gene:

Gene:

SHQ1

Ensembl Gene ID:

ENSAPLG00000013926

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040120

14337637 - 14383206

45570

ENSAPLT00000029609

14339034 - 14383206

44173

ENSAPLT00000021856

14337637 - 14383206

45570

ENSAPLT00000014512

14337637 - 14383206

45570