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Intron Name: Anas_platyrhynchos_platyrhynchos_13_14427787_14461229_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14427787 - 14461229

Intron Length:

33443

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGCCC

5'SS Class:

major

3'SS Sequence:

ATTGTCATTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

ATCTCTTTATTG

Flanking Amino Acid:

ICDVRKGTSTRKPRINSQLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

63.3

41.2

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

73.8

0.54

0.9

67.7

38.3

Minor 5ss

32.1

-2

3.2

43.2

43.9

Minor BPS

0.11

1.7

60.98

41.9

Associated Gene:

Gene:

RYBP

Ensembl Gene ID:

ENSAPLG00000013882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021176

14425771 - 14466129

40359

ENSAPLT00000014457

14424733 - 14465603

40871