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Intron Name: Anas_platyrhynchos_platyrhynchos_13_14628933_14630322_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
14628933 - 14630322

Intron Length:
1390

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAACTTTC

5'SS Class:
strong_major

3'SS Sequence:
CTCTTCCATGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTTTTTTAATG

Flanking Amino Acid:
GEQFMDCCAADDEVIGVSVS

Intron Amino Acid Position:
249

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.1
0.8
1.1
82.3
32.2

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
78.6
0.64
0.8
73.5
30.4

Minor 5ss
51.2
0.04
2.5
70.2
40.4

Minor BPS
78
0.74
1.1
78.3
32.8

Associated Gene:

Gene:
EIF4E3

Ensembl Gene ID:

Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14613594 - 14632386
18793