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Intron Name: Anas_platyrhynchos_platyrhynchos_13_14707218_14814535_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

14707218 - 14814535

Intron Length:

107318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTCAT

U12 Branch Point Sequence:

TGTGTGTTACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

70.2

35.9

Major BPS

0.67

1.1

77.7

37.1

Major PPT

89.2

0.88

0.6

84.8

22.9

Minor 5ss

29.2

-2.4

2.8

32.4

36.1

Minor BPS

47.4

-0.1

2.3

71.56

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011828

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045128

14707090 - 15025515

318426

ENSAPLT00000030609

14707090 - 15025515

318426