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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_15181568_15181850_F

Intron Information:

Intron Rank:
142129
Intron Class:
major
Intron Phase:
Intron Coordinates:
15181568 - 15181850
Intron Length:
283

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTTTTTATG
5'SS Class:
major
3'SS Sequence:
CTTTGATCTTTAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTTAA
U12 Branch Point Sequence:
TTGTTTTTAACA
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
66.8
0.4
1.2
68.4
42
Major BPS
87.3
0.93
0.8
78
36.5
Major PPT
77.1
0.61
0.8
74.5
35.4
Minor 5ss
41.9
-0.9
2.4
51.9
44.6
Minor BPS
79.5
0.92
1
82.37
32.8

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000026531
Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000024824
15181429 - 15186708
5280