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Intron Name: Anas_platyrhynchos_platyrhynchos_13_15401885_15403349_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15401885 - 15403349

Intron Length:

1465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGGAT

5'SS Class:

major

3'SS Sequence:

TTTACTATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCACCTTTACT

Flanking Amino Acid:

NTHSRASCMQMDDVIDDIIS

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.1

39.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.7

0.76

0.8

34.8

Minor 5ss

29.9

-2.3

3.8

46.5

48.8

Minor BPS

70.4

0.72

1.7

85.22

Associated Gene:

Gene:

MITF

Ensembl Gene ID:

ENSAPLG00000011965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018929

15388921 - 15464990

76070

ENSAPLT00000012493

15388146 - 15487521

99376