Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_15612428_15613403_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

15612428 - 15613403

Intron Length:

976

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGTATG

5'SS Class:

major

3'SS Sequence:

AATCTGTCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TACACTATAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

71.9

39.5

Major BPS

74.5

0.61

79.6

29.1

Major PPT

73.5

0.53

0.9

65.6

40.2

Minor 5ss

36.1

-1.6

2.9

48.1

41.6

Minor BPS

49.9

0.07

1.7

68.32

Associated Gene:

Gene:

FRMD4B

Ensembl Gene ID:

ENSAPLG00000012468

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013067

15612362 - 15636568

24207

ENSAPLT00000043417

15612362 - 15636448

24087