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Intron Name: Anas_platyrhynchos_platyrhynchos_13_15613462_15614402_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15613462 - 15614402

Intron Length:

941

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TCATGCAGACTT

Flanking Amino Acid:

TYGVHYYGVKDKQGIPWWLG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

1.1

84.4

27.7

Major BPS

87.3

0.93

0.8

36.5

Major PPT

0.79

0.6

84.3

23.6

Minor 5ss

31.4

-2.1

2.4

41.4

Minor BPS

40.4

-0.6

2.2

58.27

44.8

Associated Gene:

Gene:

FRMD4B

Ensembl Gene ID:

ENSAPLG00000012468

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043417

15612362 - 15636448

24087

ENSAPLT00000013067

15612362 - 15636568

24207