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Intron Name: Anas_platyrhynchos_platyrhynchos_13_15662389_15665122_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

15662389 - 15665122

Intron Length:

2734

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTTAGTGCG

5'SS Class:

major

3'SS Sequence:

ATGTTCTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAC

U12 Branch Point Sequence:

TGCAACTGAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.2

61.8

Major BPS

0.5

0.9

61.4

35.9

Major PPT

0.56

69.9

40.9

Minor 5ss

28.9

-2.4

2.8

26.4

Minor BPS

50.8

0.1

1.7

67.72

42.7

Associated Gene:

Gene:

UBA3

Ensembl Gene ID:

ENSAPLG00000013254

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013841

15662347 - 15675910

13564

ENSAPLT00000045120

15661862 - 15675201

13340