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Intron Name: Anas_platyrhynchos_platyrhynchos_13_15668221_15668765_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15668221 - 15668765

Intron Length:

545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TGCATTTGAAAT

Flanking Amino Acid:

VSNLNRQFLFRPKDVGRPKA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

81.8

31.8

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

87.9

0.85

0.8

80.2

37.3

Minor 5ss

34.8

-1.7

3.3

49.9

46.4

Minor BPS

48.4

-0

1.5

63.17

40.8

Associated Gene:

Gene:

UBA3

Ensembl Gene ID:

ENSAPLG00000013254

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045120

15661862 - 15675201

13340

ENSAPLT00000013841

15662347 - 15675910

13564