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Intron Name: Anas_platyrhynchos_platyrhynchos_13_15670742_15670868_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15670742 - 15670868

Intron Length:

127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTCC

5'SS Class:

strong_major

3'SS Sequence:

CCCAACCACTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCCCAA

U12 Branch Point Sequence:

TTGTCCCCAACC

Flanking Amino Acid:

ECTLELYPPQVNFPMCTIAS

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

77.7

31.1

Major BPS

50.5

0.01

1.3

60.6

37.4

Major PPT

58.7

0.2

0.9

54.1

35.1

Minor 5ss

41.5

-0.9

2.7

54.2

42.9

Minor BPS

0.32

1.9

75.74

40.4

Associated Gene:

Gene:

UBA3

Ensembl Gene ID:

ENSAPLG00000013254

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045120

15661862 - 15675201

13340

ENSAPLT00000013841

15662347 - 15675910

13564