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Intron Name: Anas_platyrhynchos_platyrhynchos_13_15671422_15672856_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15671422 - 15672856

Intron Length:

1435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGGAA

U12 Branch Point Sequence:

TTTGTTTTTACA

Flanking Amino Acid:

IKGVTYRLTQGVVKRIIPAV

Intron Amino Acid Position:

283

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.5

1.12

0.6

90.6

20.3

Major BPS

62.2

0.3

1.4

63.4

44.3

Major PPT

92.3

0.95

0.7

87.5

Minor 5ss

36.3

-1.6

3.3

47.2

Minor BPS

60.3

0.32

1.7

74.12

37.8

Associated Gene:

Gene:

UBA3

Ensembl Gene ID:

ENSAPLG00000013254

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045120

15661862 - 15675201

13340

ENSAPLT00000013841

15662347 - 15675910

13564