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Intron Name: Anas_platyrhynchos_platyrhynchos_13_15673579_15674202_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15673579 - 15674202

Intron Length:

624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTGTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

AAAGACATAACC

Flanking Amino Acid:

YTYTFEAERKENCPACSQLP

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

86.4

29.2

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

77.3

0.62

0.9

72.8

37.5

Minor 5ss

-1.7

3.3

46.3

Minor BPS

47.6

-0.2

1.9

57.43

40.2

Associated Gene:

Gene:

UBA3

Ensembl Gene ID:

ENSAPLG00000013254

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045120

15661862 - 15675201

13340

ENSAPLT00000013841

15662347 - 15675910

13564