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Intron Name: Anas_platyrhynchos_platyrhynchos_13_15676650_15678375_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15676650 - 15678375

Intron Length:

1726

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCGGC

5'SS Class:

major

3'SS Sequence:

TTTATTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTTTATTG

Flanking Amino Acid:

PDAVIPDYSEGTNSLISGGW

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.5

0.73

0.8

81.3

36.3

Minor 5ss

36.2

-1.6

3.3

41.6

45.3

Minor BPS

57.3

0.09

1.6

61.8

41.5

Associated Gene:

Gene:

TMF1

Ensembl Gene ID:

ENSAPLG00000013459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047130

15676343 - 15691043

14701

ENSAPLT00000014058

15676343 - 15691043

14701