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Intron Name: Anas_platyrhynchos_platyrhynchos_13_15682508_15683124_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15682508 - 15683124

Intron Length:

617

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

TTTTCTTTACAG

Flanking Amino Acid:

EEQIKGLMEEGEKLSKQQLQ

Intron Amino Acid Position:

627

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

78.6

0.71

79.6

32.9

Major PPT

89.6

0.89

0.7

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

63.6

0.29

1.8

72.3

40.7

Associated Gene:

Gene:

TMF1

Ensembl Gene ID:

ENSAPLG00000013459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047130

15676343 - 15691043

14701

ENSAPLT00000014058

15676343 - 15691043

14701