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Intron Name: Anas_platyrhynchos_platyrhynchos_13_15687523_15687906_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15687523 - 15687906

Intron Length:

384

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATATATC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAG

U12 Branch Point Sequence:

GGTTCTCTAACC

Flanking Amino Acid:

AGLQTSFLSQDDSHDHSFGP

Intron Amino Acid Position:

1022

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

0.9

80.3

32.3

Major BPS

75.6

0.64

1.5

34.5

Major PPT

84.8

0.78

0.8

80.6

31.4

Minor 5ss

45.7

-0.4

2.6

62.6

42.2

Minor BPS

64.1

0.42

1.7

72.92

37.5

Associated Gene:

Gene:

TMF1

Ensembl Gene ID:

ENSAPLG00000013459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047130

15676343 - 15691043

14701

ENSAPLT00000014058

15676343 - 15691043

14701