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Intron Name: Anas_platyrhynchos_platyrhynchos_13_15688639_15689418_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15688639 - 15689418

Intron Length:

780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCCATCATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAC

U12 Branch Point Sequence:

AACTCCATCATT

Flanking Amino Acid:

EIPKLRAQLKDLDQRYNTIL

Intron Amino Acid Position:

1113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.6

1.07

0.7

84.1

26.6

Major BPS

61.3

0.28

30.6

Major PPT

76.2

0.59

0.9

69.6

35.2

Minor 5ss

-1.9

3.1

41.6

Minor BPS

49.1

0.01

68.38

42.6

Associated Gene:

Gene:

TMF1

Ensembl Gene ID:

ENSAPLG00000013459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047130

15676343 - 15691043

14701

ENSAPLT00000014058

15676343 - 15691043

14701