Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_15704329_15704857_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15704329 - 15704857

Intron Length:

529

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

AATTTTATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTTTTTAATT

Flanking Amino Acid:

RYGLFYNTPLISGCHGTGLF

Intron Amino Acid Position:

333

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

73.2

37.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.9

0.72

0.9

78.8

38.6

Minor 5ss

31.6

-2.1

2.9

39.6

39.8

Minor BPS

77.9

0.95

1.1

86.64

33.8

Associated Gene:

Gene:

EOGT

Ensembl Gene ID:

ENSAPLG00000013712

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021097

15693481 - 15711368

17888