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Intron Name: Anas_platyrhynchos_platyrhynchos_13_15707234_15708905_F


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
15707234 - 15708905

Intron Length:
1672

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAA|GTACGTATG

5'SS Class:
major

3'SS Sequence:
GTGTTGTCTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AGATCAC

U12 Branch Point Sequence:
AGATCACTATTT

Flanking Amino Acid:
LEVKVVDYKYKELEFSEQLR

Intron Amino Acid Position:
376

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.6
0.65
1
75.7
40.3

Major BPS
54.4
0.11
1.2
57.5
39.1

Major PPT
76.2
0.59
1
69.6
41.6

Minor 5ss
40
-1.1
3
51
39.8

Minor BPS
44.4
-0.3
2
62.5
41

Associated Gene:

Gene:
EOGT

Ensembl Gene ID:

Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

15693481 - 15711368
17888

15693481 - 15710467
16987