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Intron Name: Anas_platyrhynchos_platyrhynchos_13_15759181_15794542_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15759181 - 15794542

Intron Length:

35362

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGCT

5'SS Class:

strong_major

3'SS Sequence:

CTGCAATTACTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

CTCTCCATCACT

Flanking Amino Acid:

ASSHHPRGHTGQHQVKQGTC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

72.5

37.3

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

59.9

0.22

41.5

Minor 5ss

31.7

-2.1

3.6

47.8

47.9

Minor BPS

55.8

0.26

2.1

76.47

Associated Gene:

Gene:

TAFA4

Ensembl Gene ID:

ENSAPLG00000014143

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014726

15755976 - 15805423

49448

ENSAPLT00000043062

15755976 - 15801509

45534

ENSAPLT00000029135

15755976 - 15795081

39106