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Intron Name: Anas_platyrhynchos_platyrhynchos_13_16082412_16086829_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

16082412 - 16086829

Intron Length:

4418

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCTGG

5'SS Class:

major

3'SS Sequence:

GCCCCTCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCGCAT

U12 Branch Point Sequence:

TTGCGAGCAAGC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

60.6

46.7

Major BPS

45.9

-0.2

1.5

53.3

44.2

Major PPT

0.45

0.8

60.6

35.2

Minor 5ss

41.9

-0.9

3.2

55.4

48.8

Minor BPS

32.1

-1.3

2.5

44.88

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014295

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024370

15869023 - 16086926

217904