Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_16183757_16206272_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16183757 - 16206272

Intron Length:

22516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTCATTTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

ATTATGTTATTT

Flanking Amino Acid:

RSARLRGGCPAVQLTSRRWL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

68.7

38.1

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

79.8

0.67

0.8

72.6

37.5

Minor 5ss

27.1

-2.6

31.9

42.5

Minor BPS

47.2

-0.1

2.2

70.29

41.3

Associated Gene:

Gene:

SUCLG2

Ensembl Gene ID:

ENSAPLG00000014378

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015029

16183673 - 16295212

111540