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Intron Name: Anas_platyrhynchos_platyrhynchos_13_16342514_16347750_F

Intron Information:

Intron Rank:

130832

Intron Class:

major

Intron Phase:

Intron Coordinates:

16342514 - 16347750

Intron Length:

5237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGACT

5'SS Class:

strong_major

3'SS Sequence:

TTGGCTTTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

AATTGAGGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

76.3

39.1

Major BPS

81.9

0.79

0.9

80.1

Major PPT

78.7

0.65

0.9

76.7

37.4

Minor 5ss

33.8

-1.8

3.4

49.6

46.4

Minor BPS

39.9

-0.6

2.4

61.69

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020240

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047625

16341771 - 16348487

6717