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Intron Name: Anas_platyrhynchos_platyrhynchos_13_16389068_16391264_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16389068 - 16391264

Intron Length:

2197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

GTATCTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATG

Flanking Amino Acid:

CTILLGPPIGGTLIDTFGDY

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

75.7

34.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.4

0.73

0.9

76.2

37.6

Minor 5ss

31.4

-2.1

3.2

35.2

41.4

Minor BPS

0.74

1.1

78.3

32.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018652

16387735 - 16420206

32472

ENSAPLT00000015183

16387735 - 16410327

22593