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Intron Name: Anas_platyrhynchos_platyrhynchos_13_16392129_16396936_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16392129 - 16396936

Intron Length:

4808

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

TGTATCTCAACT

Flanking Amino Acid:

QLYICVGFITGFGLALNLQP

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.8

33.7

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

84.1

0.77

0.8

76.4

37.7

Minor 5ss

32.8

-2

2.9

40.7

45.1

Minor BPS

66.1

0.58

1.6

81.87

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018652

16387735 - 16420206

32472

ENSAPLT00000015183

16387735 - 16410327

22593