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Intron Name: Anas_platyrhynchos_platyrhynchos_13_16569048_16573669_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16569048 - 16573669

Intron Length:

4622

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

CTTCTTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

TCTCGCTTAAAC

Flanking Amino Acid:

AFAELLNLQEVRLNNNELTT

Intron Amino Acid Position:

215

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

83.8

34.5

Major BPS

0.6

1.2

75.9

36.3

Major PPT

84.9

0.78

0.8

79.9

32.1

Minor 5ss

43.7

-0.7

2.9

61.3

Minor BPS

57.8

0.22

1.9

69.09

42.1

Associated Gene:

Gene:

LRIG1

Ensembl Gene ID:

ENSAPLG00000014836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024175

16537431 - 16620432

83002

ENSAPLT00000015464

16537431 - 16620299

82869

ENSAPLT00000028060

16537431 - 16620299

82869