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Intron Name: Anas_platyrhynchos_platyrhynchos_13_16592987_16595280_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16592987 - 16595280

Intron Length:

2294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGAGTAGA

5'SS Class:

major

3'SS Sequence:

TTGGTGATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTTAATATACTT

Flanking Amino Acid:

KAFRLPRLIQLELNRNRIRL

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

67.4

39.4

Major BPS

90.7

1.01

0.7

19.9

Major PPT

70.2

0.45

43.8

Minor 5ss

32.6

-2

2.8

43.2

43.8

Minor BPS

-0.2

70.4

40.8

Associated Gene:

Gene:

LRIG1

Ensembl Gene ID:

ENSAPLG00000014836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024175

16537431 - 16620432

83002

ENSAPLT00000015464

16537431 - 16620299

82869

ENSAPLT00000028060

16537431 - 16620299

82869