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Intron Name: Anas_platyrhynchos_platyrhynchos_13_16596530_16601332_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16596530 - 16601332

Intron Length:

4803

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTTGG

5'SS Class:

major

3'SS Sequence:

TTTTTCTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTGAT

U12 Branch Point Sequence:

TTGGGCTGATGG

Flanking Amino Acid:

GWSFCQKLHELILSYNNLTR

Intron Amino Acid Position:

430

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

43.9

Major BPS

58.4

0.21

1.4

51.1

46.3

Major PPT

89.7

0.89

0.6

89.1

19.9

Minor 5ss

42.5

-0.8

2.8

59.2

45.2

Minor BPS

37.8

-1

2.3

43.36

Associated Gene:

Gene:

LRIG1

Ensembl Gene ID:

ENSAPLG00000014836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024175

16537431 - 16620432

83002

ENSAPLT00000015464

16537431 - 16620299

82869

ENSAPLT00000028060

16537431 - 16620299

82869