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Intron Name: Anas_platyrhynchos_platyrhynchos_13_16609166_16610435_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16609166 - 16610435

Intron Length:

1270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTAAC

5'SS Class:

major

3'SS Sequence:

TTGTGTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAA

U12 Branch Point Sequence:

TTTTGCTCAAAC

Flanking Amino Acid:

AFSGLEALEHLNLGDNAIRS

Intron Amino Acid Position:

529

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.52

1.1

70.8

34.7

Major BPS

70.6

0.51

1.1

71.6

36.4

Major PPT

82.6

0.73

0.9

77.3

Minor 5ss

33.5

-1.9

2.8

46.6

41.8

Minor BPS

58.2

0.24

2.1

76.17

39.8

Associated Gene:

Gene:

LRIG1

Ensembl Gene ID:

ENSAPLG00000014836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028060

16537431 - 16620299

82869

ENSAPLT00000024175

16537431 - 16620432

83002