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Intron Name: Anas_platyrhynchos_platyrhynchos_13_16610508_16612332_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16610508 - 16612332

Intron Length:

1825

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TGTTCCCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAGTCAC

U12 Branch Point Sequence:

GGAGTCACAGCA

Flanking Amino Acid:

AFAKMKSLRQLHINSDSFLC

Intron Amino Acid Position:

529

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

80.4

Major BPS

49.7

-0

1.3

55.1

42.1

Major PPT

80.8

0.69

0.8

74.3

30.8

Minor 5ss

40.3

-1.1

2.9

61.3

Minor BPS

38.1

-0.9

1.8

43.02

37.9

Associated Gene:

Gene:

LRIG1

Ensembl Gene ID:

ENSAPLG00000014836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028060

16537431 - 16620299

82869

ENSAPLT00000024175

16537431 - 16620432

83002

ENSAPLT00000015464

16537431 - 16620299

82869