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Intron Name: Anas_platyrhynchos_platyrhynchos_13_16612497_16614035_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16612497 - 16614035

Intron Length:

1539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTCCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

CCAGCACTAACC

Flanking Amino Acid:

FAVLPESFVCDDVPKPQIII

Intron Amino Acid Position:

584

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

Major BPS

64.5

0.36

65.2

28.2

Major PPT

79.7

0.67

0.8

77.2

31.5

Minor 5ss

40.3

-1.1

3.1

56.2

42.2

Minor BPS

45.1

-0.3

52.88

44.2

Associated Gene:

Gene:

LRIG1

Ensembl Gene ID:

ENSAPLG00000014836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028060

16537431 - 16620299

82869

ENSAPLT00000024175

16537431 - 16620432

83002

ENSAPLT00000015464

16537431 - 16620299

82869