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Intron Name: Anas_platyrhynchos_platyrhynchos_13_16616192_16618273_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16616192 - 16618273

Intron Length:

2082

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCTCTC

5'SS Class:

major

3'SS Sequence:

TCATTTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TAATCCTAAGCC

Flanking Amino Acid:

KSEEYSVTNTGMCQTDAGRC

Intron Amino Acid Position:

949

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.2

67.3

44.3

Major BPS

84.4

0.85

1.1

34.5

Major PPT

81.5

0.71

0.9

76.4

37.4

Minor 5ss

43.3

-0.7

3.1

42.6

Minor BPS

56.7

0.19

1.9

68.73

42.4

Associated Gene:

Gene:

LRIG1

Ensembl Gene ID:

ENSAPLG00000014836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028060

16537431 - 16620299

82869