Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_16625831_16629176_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16625831 - 16629176

Intron Length:

3346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGCCA

5'SS Class:

major

3'SS Sequence:

CCTTTGCCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTCAC

U12 Branch Point Sequence:

TCACCCTGAAGC

Flanking Amino Acid:

GGIWRTQGLSGLFAGVVPRM

Intron Amino Acid Position:

296

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.2

42.9

Major BPS

64.9

0.37

29.8

Major PPT

80.4

0.68

0.8

31.8

Minor 5ss

30.6

-2.2

3.2

31.7

42.2

Minor BPS

52.1

0.04

1.8

61.78

43.1

Associated Gene:

Gene:

SLC25A26

Ensembl Gene ID:

ENSAPLG00000015089

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033944

16625734 - 16708021

82288

ENSAPLT00000015762

16625374 - 16708021

82648