Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_16704343_16707808_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16704343 - 16707808

Intron Length:

3466

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTATTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

GCTTCTTTATTT

Flanking Amino Acid:

EPRESWAALAVTCPIQLGQN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

66.2

39.6

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

78.7

0.64

83.7

30.1

Minor 5ss

-2.5

33.4

41.6

Minor BPS

64.1

0.52

1.6

76.04

41.4

Associated Gene:

Gene:

SLC25A26

Ensembl Gene ID:

ENSAPLG00000015089

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033944

16625734 - 16708021

82288