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Intron Name: Anas_platyrhynchos_platyrhynchos_13_16711500_16712470_R

Intron Information:

Intron Rank:

145931

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16711500 - 16712470

Intron Length:

971

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTACTGCTT

5'SS Class:

weak_major

3'SS Sequence:

TCTCTGTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGCCAA

U12 Branch Point Sequence:

ATGGCCAAGAGG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.1

0.03

1.2

52.1

44.2

Major BPS

45.2

-0.3

1.4

50.2

45.2

Major PPT

82.3

0.73

0.8

76.6

Minor 5ss

38.3

-1.3

3.8

61.7

44.1

Minor BPS

37.9

-1.1

2.1

41.05

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031496

16711127 - 16722821

11695