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Intron Name: Anas_platyrhynchos_platyrhynchos_13_16712535_16721918_R

Intron Information:

Intron Rank:

145932

Intron Class:

major

Intron Phase:

Intron Coordinates:

16712535 - 16721918

Intron Length:

9384

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

AGTAGTTAAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.9

30.1

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

83.5

0.75

0.8

76.7

37.4

Minor 5ss

-2.1

2.8

42.5

44.3

Minor BPS

43.8

-0.3

2.1

60.93

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031496

16711127 - 16722821

11695