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Intron Name: Anas_platyrhynchos_platyrhynchos_13_17026834_17030184_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17026834 - 17030184

Intron Length:

3351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTAATCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

AATTCTTTAATC

Flanking Amino Acid:

DVPEMSSSFTAESGDQDEHN

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

70.2

35.7

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

75.9

0.58

0.9

69.3

35.6

Minor 5ss

30.6

-2.2

3.1

38.6

46.4

Minor BPS

77.9

0.86

77.87

31.2

Associated Gene:

Gene:

MAGI1

Ensembl Gene ID:

ENSAPLG00000015151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020095

16784897 - 17103079

318183

ENSAPLT00000047968

16784897 - 17103079

318183

ENSAPLT00000015821

16825669 - 17102662

276994

ENSAPLT00000041725

16784897 - 17103079

318183

ENSAPLT00000027158

16784897 - 17103079

318183

ENSAPLT00000025942

16784897 - 17103079

318183