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Intron Name: Anas_platyrhynchos_platyrhynchos_13_17030396_17033920_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17030396 - 17033920

Intron Length:

3525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAAGCAC

5'SS Class:

weak_major

3'SS Sequence:

TTTTGGTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

GTTTATTAACAA

Flanking Amino Acid:

YTENGEVYFIDHNTKTTSWL

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.1

0.21

1.1

40.3

Major BPS

81.9

0.79

0.8

81.9

Major PPT

85.5

0.8

0.9

76.9

42.1

Minor 5ss

31.7

-2.1

3.4

37.7

41.3

Minor BPS

43.7

-0.4

2.1

57.99

41.5

Associated Gene:

Gene:

MAGI1

Ensembl Gene ID:

ENSAPLG00000015151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020095

16784897 - 17103079

318183

ENSAPLT00000047968

16784897 - 17103079

318183

ENSAPLT00000015821

16825669 - 17102662

276994

ENSAPLT00000041725

16784897 - 17103079

318183

ENSAPLT00000027158

16784897 - 17103079

318183

ENSAPLT00000025942

16784897 - 17103079

318183