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Intron Name: Anas_platyrhynchos_platyrhynchos_13_17034004_17037213_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17034004 - 17037213

Intron Length:

3210

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTGGAGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTCTCATTTACT

Flanking Amino Acid:

QKPLEECEDDEGVHTEELDS

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

71.3

32.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

52.9

0.07

1.2

55.9

37.9

Minor 5ss

30.9

-2.2

3.4

38.5

41.1

Minor BPS

59.6

0.38

78.44

43.2

Associated Gene:

Gene:

MAGI1

Ensembl Gene ID:

ENSAPLG00000015151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027158

16784897 - 17103079

318183

ENSAPLT00000020095

16784897 - 17103079

318183

ENSAPLT00000015821

16825669 - 17102662

276994

ENSAPLT00000047968

16784897 - 17103079

318183

ENSAPLT00000041725

16784897 - 17103079

318183