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Intron Name: Anas_platyrhynchos_platyrhynchos_13_17072918_17081538_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17072918 - 17081538

Intron Length:

8621

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTGAGTATG

5'SS Class:

major

3'SS Sequence:

TCTTTCCCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTGATTAAAA

Flanking Amino Acid:

AQSRSMYESRLPDYQEQDIF

Intron Amino Acid Position:

730

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.2

77.8

38.7

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

87.7

0.85

0.6

85.5

21.9

Minor 5ss

35.3

-1.7

2.8

41.7

38.2

Minor BPS

58.9

0.27

2.1

78.09

38.1

Associated Gene:

Gene:

MAGI1

Ensembl Gene ID:

ENSAPLG00000015151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027158

16784897 - 17103079

318183

ENSAPLT00000015821

16825669 - 17102662

276994