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Intron Name: Anas_platyrhynchos_platyrhynchos_13_17086351_17089644_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17086351 - 17089644

Intron Length:

3294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

ACCAATACAAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AACAAAA

U12 Branch Point Sequence:

AACCCCCAAACC

Flanking Amino Acid:

VSRPEAGTTFAGNACVAMPH

Intron Amino Acid Position:

993

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

82.1

37.7

Major BPS

51.5

0.04

0.9

57.3

24.9

Major PPT

47.6

-0.1

1.1

42.6

35.4

Minor 5ss

40.6

-1

3.1

60.2

44.1

Minor BPS

46.6

-0.2

56.41

41.5

Associated Gene:

Gene:

MAGI1

Ensembl Gene ID:

ENSAPLG00000015151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047968

16784897 - 17103079

318183

ENSAPLT00000041725

16784897 - 17103079

318183

ENSAPLT00000027158

16784897 - 17103079

318183

ENSAPLT00000025942

16784897 - 17103079

318183