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Intron Name: Anas_platyrhynchos_platyrhynchos_13_17095559_17095677_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17095559 - 17095677

Intron Length:

119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGACTG

5'SS Class:

major

3'SS Sequence:

TCATTCACTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

GTTTCATTCACT

Flanking Amino Acid:

HTPQQIPQETSRNNTKPKQE

Intron Amino Acid Position:

1009

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.3

66.4

45.1

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

76.9

0.6

0.9

70.8

34.4

Minor 5ss

-2.2

3.1

39.3

45.9

Minor BPS

64.7

0.54

86.23

39.4

Associated Gene:

Gene:

MAGI1

Ensembl Gene ID:

ENSAPLG00000015151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020095

16784897 - 17103079

318183

ENSAPLT00000047968

16784897 - 17103079

318183

ENSAPLT00000015821

16825669 - 17102662

276994

ENSAPLT00000041725

16784897 - 17103079

318183

ENSAPLT00000027158

16784897 - 17103079

318183

ENSAPLT00000025942

16784897 - 17103079

318183