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Intron Name: Anas_platyrhynchos_platyrhynchos_13_17096745_17097967_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17096745 - 17097967

Intron Length:

1223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGCACA

5'SS Class:

major

3'SS Sequence:

ATTGCTTTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTCTCTTTTATT

Flanking Amino Acid:

GPAERCGKMRIGDEILEING

Intron Amino Acid Position:

1080

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

64.2

41.8

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

73.2

0.52

68.9

41.4

Minor 5ss

45.3

-0.5

2.5

49.9

46.2

Minor BPS

68.7

0.67

1.6

83.34

38.2

Associated Gene:

Gene:

MAGI1

Ensembl Gene ID:

ENSAPLG00000015151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020095

16784897 - 17103079

318183

ENSAPLT00000047968

16784897 - 17103079

318183

ENSAPLT00000015821

16825669 - 17102662

276994

ENSAPLT00000041725

16784897 - 17103079

318183

ENSAPLT00000027158

16784897 - 17103079

318183

ENSAPLT00000025942

16784897 - 17103079

318183