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Intron Name: Anas_platyrhynchos_platyrhynchos_13_17169850_17201862_F

Intron Information:

Intron Rank:

125167

Intron Class:

major

Intron Phase:

Intron Coordinates:

17169850 - 17201862

Intron Length:

32013

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTCCATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTCCAT

U12 Branch Point Sequence:

TGCTGTTCCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

59.5

0.24

1.5

72.5

43.5

Major PPT

81.7

0.71

0.8

78.4

34.7

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

42.1

-0.5

2.2

59.97

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017409

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022341

17169757 - 17202189

32433