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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1721429_1724004_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1721429 - 1724004

Intron Length:

2576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATGTTTTAATT

Flanking Amino Acid:

MLLDKTHNFGGNT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

80.6

31.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.5

0.84

0.7

81.2

36.5

Minor 5ss

37.1

-1.5

2.7

44.2

37.1

Minor BPS

69.2

0.68

1.3

36.6

Associated Gene:

Gene:

CHDH

Ensembl Gene ID:

ENSAPLG00000013484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014038

1721301 - 1731535

10235