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Intron Name: Anas_platyrhynchos_platyrhynchos_13_17227892_17228885_F

Intron Information:

Intron Rank:

140747

Intron Class:

major

Intron Phase:

Intron Coordinates:

17227892 - 17228885

Intron Length:

994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTGAGTAAC

5'SS Class:

major

3'SS Sequence:

TCTCTCTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TCTCTCTTCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

70.4

35.5

Major BPS

0.65

1.5

85.7

34.9

Major PPT

84.2

0.77

0.7

79.2

26.3

Minor 5ss

32.6

-2

2.7

37.5

40.1

Minor BPS

61.5

0.36

1.8

72.02

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025774

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017671

17218518 - 17229693

11176

ENSAPLT00000023668

17223019 - 17228929

5911