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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1724810_1725241_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1724810 - 1725241

Intron Length:

432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCAT

5'SS Class:

strong_major

3'SS Sequence:

ATATAAATTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TCTATGTTAATA

Flanking Amino Acid:

FGWMDMTVHKGQRWSAASAY

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

80.3

34.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

64.5

0.33

57.1

42.4

Minor 5ss

35.2

-1.7

3.1

49.5

46.7

Minor BPS

53.4

0.1

2.1

66.99

40.2

Associated Gene:

Gene:

CHDH

Ensembl Gene ID:

ENSAPLG00000013484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014038

1721301 - 1731535

10235